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Variant View

The variant view, focusing on a shorter genomic region, shows additional tracks on top of the tracks included in the genome view, including point mutations, indels, copy number variation like gains and loss of heterozgosity (LOH), and genes.

Variant View
Figure. A linear view that shows the region that is selected by an interactive brush of the genome view.

Interactions​

  • You can click on a structural variant of your interest using the mouse. Upon clicking, the browser instantly shows a breakpoint view on the bottom that highlights read alignments around the breakpoints.